Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| energy-coupling factor transporter transmembrane protein ecft | Cabys_1317 | D5AUZ7 | + | 1536205 - 1536924 | 27231.6 |
| cobalt/nickel transport system atp-binding protein | Cabys_1318 | Q7NNW9 | + | 1536915 - 1537658 | 27642.5 |
| tonb-dependent receptor plug domain | Cabys_1319 | A7MXY8 | + | 1537675 - 1539537 | 68801.5 |
| hypothetical protein | Cabys_1320 | Not Available | + | 1539542 - 1540060 | 19172.1 |
| methyltransferase domain-containing protein | Cabys_1321 | A6W0X8 | + | 1540064 - 1540672 | 23131.3 |
| lipopolysaccharide export system permease protein | Cabys_1322 | Q9ZC95 | + | 1540866 - 1542272 | 54165.4 |
| hypothetical protein | Cabys_1323 | Not Available | + | 1542314 - 1542490 | 6843.12 |
| lipopolysaccharide export system permease protein | Cabys_1324 | P0ADC7 | + | 1542487 - 1543566 | 40814.8 |
| hypothetical protein | Cabys_1325 | Not Available | - | 1543525 - 1543674 | 5719.89 |
| cbs domain-containing protein | Cabys_1326 | Q9LEV3 | + | 1543893 - 1544327 | 16263.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.