Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nitroreductase | Cabys_1257 | O26223 | + | 1478727 - 1479335 | 23062.0 |
| rieske (2fe-2s) domain-containing protein | Cabys_1258 | A8G3H7 | + | 1479511 - 1479909 | 14979.5 |
| cytochrome b/b6/petb | Cabys_1259 | Q9B205 | + | 1479916 - 1480806 | 33184.4 |
| cytochrome c family protein | Cabys_1260 | Not Available | + | 1480785 - 1482584 | 66929.9 |
| cytochrome c3 | Cabys_1261 | Not Available | + | 1482581 - 1484164 | 59932.1 |
| transposase dde domain-containing protein | Cabys_1262 | Not Available | - | 1484456 - 1486165 | 66760.7 |
| hypothetical protein | Cabys_1263 | Not Available | - | 1486781 - 1486897 | 4321.45 |
| rhodanese-related sulfurtransferase | Cabys_1264 | P44854 | - | 1486891 - 1487523 | 23803.8 |
| hypothetical protein | Cabys_1265 | Not Available | - | 1487520 - 1488113 | 21805.2 |
| hypothetical protein | Cabys_1266 | Q87AD4 | - | 1488131 - 1488634 | 17808.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.