Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Cabys_1247 | Not Available | - | 1463840 - 1465411 | 59777.8 |
| putative rna-binding protein containing a pin domain | Cabys_1248 | Not Available | - | 1465430 - 1465924 | 18941.4 |
| hypothetical protein | Cabys_1249 | O05248 | + | 1466336 - 1467022 | 25034.0 |
| serine protease do | Cabys_1250 | A6VUA4 | + | 1467039 - 1468571 | 55721.1 |
| dnak molecular chaperone dnak | Cabys_1251 | Q9XCB1 | + | 1469057 - 1471003 | 70534.0 |
| dna-binding transcriptional regulator, marr family | Cabys_1252 | P96708 | + | 1471939 - 1472382 | 17446.5 |
| outer membrane protein tolc | Cabys_1253 | P24145 | + | 1472393 - 1473715 | 50145.9 |
| rnd family efflux transporter, mfp subunit | Cabys_1254 | P25196 | + | 1473731 - 1474621 | 33256.5 |
| hydrophobic/amphiphilic exporter-1, hae1 family | Cabys_1255 | P25197 | + | 1474618 - 1477683 | 112493.0 |
| nadph2:quinone reductase | Cabys_1256 | Q99536 | + | 1477683 - 1478705 | 37261.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.