Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative regulator of ras-like gtpase activity, roadblock/lc7/mglb family | Cabys_1227 | O67683 | + | 1446196 - 1446708 | 18720.4 |
| hypothetical protein | Cabys_1228 | Q1DB04 | + | 1446769 - 1447353 | 22271.9 |
| mfs transporter, umf1 family | Cabys_1229 | P42306 | + | 1447425 - 1448759 | 49236.3 |
| peptidase ma superfamily protein | Cabys_1230 | Not Available | + | 1448799 - 1449722 | 35725.9 |
| arginine decarboxylase | Cabys_1231 | B3QWJ5 | + | 1449725 - 1450270 | 19730.6 |
| agmatinase | Cabys_1232 | P72703 | + | 1450293 - 1451144 | 32393.9 |
| alpha-amylase | Cabys_1233 | P09961 | + | 1451166 - 1453292 | 82769.5 |
| c-terminal processing peptidase-3, serine peptidase, merops family s41a | Cabys_1234 | Q44879 | + | 1453456 - 1455054 | 61531.1 |
| biopolymer transport protein exbb | Cabys_1235 | O27101 | + | 1455296 - 1455787 | 17357.4 |
| biopolymer transport protein exbd | Cabys_1236 | Q9ZHV9 | + | 1455807 - 1456214 | 15098.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.