Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | + | 1393945 - 1394017 | Not Available |
| s-layer domain-containing protein | Cabys_1179 | Not Available | + | 1394072 - 1395151 | 41560.7 |
| glycosyltransferase like family 2 | Cabys_1180 | D4GYG7 | - | 1395146 - 1396162 | 38809.4 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | Cabys_1181 | P96587 | - | 1396282 - 1397439 | 43948.7 |
| por secretion system c-terminal sorting domain-containing protein | Cabys_1182 | Not Available | + | 1397699 - 1403554 | 220573.0 |
| hypothetical protein | Cabys_1183 | Not Available | - | 1403592 - 1403750 | 6047.71 |
| acetyltransferase (gnat) family protein | Cabys_1184 | Not Available | + | 1403902 - 1404804 | 34941.3 |
| nte family protein | Cabys_1185 | O34731 | + | 1404895 - 1405809 | 33917.7 |
| deob phosphopentomutase | Cabys_1186 | Q3AAQ2 | + | 1405824 - 1406993 | 43304.9 |
| hypothetical protein | Cabys_1187 | Not Available | + | 1407028 - 1407333 | 11719.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.