Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyltransferase domain-containing protein | Cabys_1159 | O34309 | + | 1370239 - 1373439 | 122944.0 |
| mraz mraz protein | Cabys_1160 | Q97H80 | + | 1373911 - 1374390 | 18377.2 |
| rsmh 16s rrna (cytosine1402-n4)-methyltransferase | Cabys_1161 | B0K3H8 | + | 1374383 - 1375315 | 35225.8 |
| hypothetical protein | Cabys_1162 | Not Available | + | 1375312 - 1375689 | 14877.7 |
| peptidoglycan synthetase ftsi | Cabys_1163 | G3XD46 | + | 1375765 - 1377756 | 74761.5 |
| hypothetical protein | Cabys_1164 | Not Available | + | 1377769 - 1377888 | 4703.82 |
| mure udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase | Cabys_1165 | Q39YM4 | + | 1377911 - 1379377 | 53806.0 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | Cabys_1166 | P96613 | + | 1379370 - 1380722 | 50084.7 |
| mray phospho-n-acetylmuramoyl-pentapeptide-transferase | Cabys_1167 | B3QWT4 | + | 1380737 - 1381840 | 41001.5 |
| murd udp-n-acetylmuramoylalanine--d-glutamate ligase | Cabys_1168 | B3QWT5 | + | 1381852 - 1383198 | 50227.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.