Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| heme exporter protein a | Cabys_1149 | P0A9U1 | + | 1358662 - 1359291 | 23975.3 |
| heme exporter protein b | Cabys_1150 | Not Available | + | 1359291 - 1359950 | 24354.7 |
| heme exporter protein c | Cabys_1151 | P38453 | + | 1360015 - 1360695 | 26815.3 |
| ccmd family protein | Cabys_1152 | Not Available | + | 1360697 - 1360840 | 5603.84 |
| cytochrome c-type biogenesis protein ccme | Cabys_1153 | Q72IU3 | + | 1360869 - 1361240 | 13643.2 |
| cytochrome c-type biogenesis protein ccmf | Cabys_1154 | Q9I3N2 | + | 1361237 - 1363456 | 83630.0 |
| glutamate dehydrogenase (nadp) | Cabys_1155 | P94598 | - | 1363598 - 1364959 | 49952.8 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | Cabys_1156 | Q7WZY4 | - | 1365302 - 1365931 | 23465.8 |
| pas domain s-box-containing protein | Cabys_1157 | Q7WZY5 | - | 1366060 - 1368393 | 89569.8 |
| glutamate dehydrogenase (nad(p)+) | Cabys_1158 | O74024 | + | 1368831 - 1370117 | 47750.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.