Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad(p) transhydrogenase subunit beta | Cabys_1139 | Q2RSB4 | + | 1346400 - 1347773 | 48251.2 |
| comf family protein | Cabys_1140 | Q8Z222 | - | 1347877 - 1348623 | 28265.0 |
| hypothetical protein | Cabys_1141 | Not Available | - | 1348756 - 1350060 | 49169.8 |
| hypothetical protein | Cabys_1142 | Not Available | - | 1350057 - 1350194 | 5488.82 |
| rna polymerase sigma factor for flagellar operon flia | Cabys_1143 | P17211 | + | 1350522 - 1351280 | 29656.1 |
| his kinase a (phospho-acceptor) domain-containing protein | Cabys_1144 | P37478 | + | 1351347 - 1352477 | 43155.8 |
| hypothetical protein | Cabys_1145 | Not Available | + | 1353162 - 1353329 | 6723.26 |
| outer membrane receptor protein, mostly fe transport | Cabys_1146 | Q32AE6 | + | 1353619 - 1356354 | 103296.0 |
| hypothetical protein | Cabys_1147 | Not Available | + | 1356524 - 1356679 | 6001.08 |
| transposase domain (duf772) | Cabys_1148 | Not Available | - | 1356871 - 1358457 | 61382.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.