Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Cabys_1129 | Not Available | + | 1337927 - 1338058 | 4934.98 |
| hypothetical protein | Cabys_1130 | Not Available | + | 1338182 - 1338346 | 6262.62 |
| hypothetical protein | Cabys_1131 | Not Available | + | 1338339 - 1338455 | 4609.36 |
| hypothetical protein | Cabys_1132 | Not Available | + | 1338615 - 1338728 | 4603.42 |
| hypothetical protein | Cabys_1133 | Not Available | - | 1338690 - 1338860 | 6568.22 |
| abc-type transport system, substrate-binding protein | Cabys_1134 | Not Available | - | 1338979 - 1340736 | 66468.1 |
| hypothetical protein | Cabys_1135 | Not Available | - | 1340760 - 1343195 | 94328.2 |
| 1,4-dihydroxy-2-naphthoate octaprenyltransferase | Cabys_1136 | P73962 | + | 1343279 - 1344817 | 57572.5 |
| nad(p) transhydrogenase subunit alpha | Cabys_1137 | Q2RSB2 | + | 1344953 - 1346089 | 40472.2 |
| nad(p) transhydrogenase subunit alpha | Cabys_1138 | Q2RSB3 | + | 1346091 - 1346387 | 10354.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.