Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| por secretion system c-terminal sorting domain-containing protein | Cabys_1119 | Not Available | + | 1325149 - 1327014 | 69821.6 |
| por secretion system c-terminal sorting domain-containing protein | Cabys_1120 | Not Available | + | 1327030 - 1329237 | 82431.7 |
| protein of unknown function (duf2809) | Cabys_1121 | O35027 | + | 1329275 - 1329682 | 15028.5 |
| hypothetical protein | Cabys_1122 | Q9F723 | + | 1329710 - 1330663 | 37646.7 |
| pyruvate phosphate dikinase, pep/pyruvate binding domain | Cabys_1123 | Q5W252 | + | 1330660 - 1333128 | 94018.5 |
| udp:flavonoid glycosyltransferase yjic, ydhe family | Cabys_1124 | Q8TTI1 | + | 1333130 - 1334446 | 49721.7 |
| hypothetical protein | Cabys_1125 | Not Available | - | 1334656 - 1334769 | 4603.42 |
| hypothetical protein | Cabys_1126 | Not Available | - | 1334928 - 1335044 | 4549.32 |
| hypothetical protein | Cabys_1127 | Not Available | - | 1335189 - 1335341 | 6021.03 |
| hypothetical protein | Cabys_1128 | Not Available | - | 1335382 - 1337682 | 90294.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.