Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Cabys_1109 | Not Available | + | 1310419 - 1312869 | 92323.6 |
| hypothetical protein | Cabys_1110 | Not Available | + | 1313402 - 1314364 | 37276.7 |
| udp-glucose 4-epimerase | Cabys_1111 | Q8PDW5 | + | 1314368 - 1315318 | 35487.3 |
| methyltransferase domain-containing protein | Cabys_1112 | D2T333 | + | 1315308 - 1316183 | 34525.4 |
| glycosyltransferase, gt2 family | Cabys_1113 | D4GYH2 | + | 1316185 - 1317081 | 34104.9 |
| glycosyl transferase family 2 | Cabys_1114 | A0QZ12 | + | 1317074 - 1318792 | 66785.1 |
| dolichyl-phosphate-mannose-protein mannosyltransferase | Cabys_1115 | Not Available | + | 1318785 - 1320413 | 61881.1 |
| geranylgeranyl diphosphate synthase, type ii | Cabys_1116 | P80042 | + | 1320417 - 1321277 | 31744.4 |
| hypothetical protein | Cabys_1117 | Not Available | + | 1321378 - 1322778 | 52861.3 |
| 4-hydroxybenzoate polyprenyltransferase | Cabys_1118 | Q9HPD9 | + | 1324091 - 1325131 | 40692.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.