Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| membrane protein involved in the export of o-antigen and teichoic acid | Cabys_1099 | P77377 | + | 1297089 - 1298573 | 56232.4 |
| nickel-dependent lactate racemase | Cabys_1100 | D9TQ02 | + | 1298574 - 1299791 | 45915.8 |
| putative o-glycosylation ligase, exosortase a-associated | Cabys_1101 | Not Available | + | 1299819 - 1301069 | 48355.0 |
| glycosyltransferase involved in cell wall bisynthesis | Cabys_1102 | Not Available | + | 1301090 - 1302463 | 53245.8 |
| sugar transferase, pep-cterm/epsh1 system associated | Cabys_1103 | P71055 | + | 1302453 - 1303607 | 43529.7 |
| polysaccharide deacetylase | Cabys_1104 | P94361 | + | 1303591 - 1304622 | 39418.4 |
| phosphotransferase enzyme family protein | Cabys_1105 | Not Available | + | 1304645 - 1305706 | 41715.9 |
| heparinase ii/iii-like protein | Cabys_1106 | Q59289 | + | 1305703 - 1307973 | 87609.4 |
| glycosyltransferase involved in cell wall bisynthesis | Cabys_1107 | Q58459 | + | 1308038 - 1309105 | 40538.9 |
| glycosyltransferase involved in cell wall bisynthesis | Cabys_1108 | Q58469 | + | 1309102 - 1310274 | 45081.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.