Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box-containing protein | Cabys_1069 | P55552 | + | 1269134 - 1270363 | 47357.8 |
| response regulator receiver domain-containing protein | Cabys_1070 | P0DOA0 | + | 1270601 - 1272136 | 58608.4 |
| iron complex transport system permease protein | Cabys_1071 | O34451 | + | 1272154 - 1273134 | 35561.0 |
| sh3 domain-containing protein | Cabys_1072 | Not Available | - | 1273135 - 1273932 | 30023.3 |
| hypothetical protein | Cabys_1073 | Not Available | + | 1274081 - 1274203 | 4838.76 |
| tetratricopeptide repeat-containing protein | Cabys_1074 | O13797 | - | 1274276 - 1274602 | 12307.9 |
| argr transcriptional regulator, argr family | Cabys_1075 | B3QWH2 | + | 1274816 - 1275262 | 16695.4 |
| radical sam-linked protein/radical sam family uncharacterized protein | Cabys_1076 | Q58376 | + | 1275300 - 1277924 | 100753.0 |
| ribonuclease g | Cabys_1077 | A0A0H3NGK0 | + | 1278004 - 1279530 | 59463.2 |
| rplu large subunit ribosomal protein l21 | Cabys_1078 | Q0AWJ0 | + | 1279619 - 1279996 | 14344.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.