Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epsc | Cabys_1031 | P39853 | + | 1216240 - 1218138 | 71115.8 |
| hypothetical protein | Cabys_1032 | Not Available | + | 1218206 - 1218319 | 4191.35 |
| hypothetical protein | Cabys_1033 | Not Available | - | 1218446 - 1218577 | 5057.18 |
| hypothetical protein | Cabys_1034 | Not Available | - | 1218760 - 1218888 | 5270.15 |
| hypothetical protein | Cabys_1035 | Not Available | - | 1219110 - 1219229 | 4768.64 |
| hypothetical protein | Cabys_1036 | Not Available | - | 1219418 - 1219540 | 4833.99 |
| hypothetical protein | Cabys_1037 | Q9UK23 | + | 1219665 - 1222124 | 90842.0 |
| Trna-val | Not Available | Not Available | + | 1222185 - 1222258 | Not Available |
| hypothetical protein | Cabys_1038 | Not Available | + | 1222610 - 1223554 | 36132.9 |
| por secretion system c-terminal sorting domain-containing protein | Cabys_1039 | Not Available | + | 1224368 - 1226182 | 68414.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.