Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Cabys_1019 | Q58939 | + | 1202729 - 1204003 | 50678.9 |
| chain length determinant protein | Cabys_1020 | Not Available | + | 1205155 - 1206324 | 45329.1 |
| na+-driven multidrug efflux pump | Cabys_1021 | Not Available | + | 1206402 - 1207592 | 44789.4 |
| o-antigen ligase | Cabys_1022 | Not Available | + | 1207589 - 1208761 | 44710.8 |
| glycosyltransferase involved in cell wall bisynthesis | Cabys_1023 | Q59002 | + | 1208758 - 1209852 | 42350.0 |
| transferase hexapeptide (six repeat-containing protein) | Cabys_1024 | P26840 | + | 1209879 - 1210409 | 19428.0 |
| heparinase ii/iii-like protein | Cabys_1025 | Q89YR9 | + | 1210546 - 1212420 | 72824.4 |
| glycosyltransferase involved in cell wall bisynthesis | Cabys_1026 | Q58469 | + | 1212417 - 1213640 | 46361.5 |
| sugar transferase involved in lps biosynthesis (colanic, teichoic acid) | Cabys_1027 | P71062 | + | 1213640 - 1214245 | 23324.0 |
| sugar o-acyltransferase, sialic acid o-acetyltransferase neud family | Cabys_1028 | Q09707 | + | 1214267 - 1214923 | 23407.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.