Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter membrane protein 2, cut1 family | Cabys_1002 | Q9KEE9 | + | 1183572 - 1184381 | 30432.5 |
| putative glycosyl hydrolase, gh43/duf377 family | Cabys_1003 | B0K2C2 | + | 1184391 - 1185641 | 47523.0 |
| putative glycosyl hydrolase, gh43/duf377 family | Cabys_1004 | Q92DF6 | + | 1185660 - 1186580 | 35160.1 |
| putative exported protein precursor | Cabys_1005 | Not Available | + | 1186571 - 1187860 | 48927.9 |
| beta-mannosidase | Cabys_1006 | Q0CCA0 | + | 1187992 - 1190433 | 95792.4 |
| tada trna(adenine34) deaminase | Cabys_1007 | P21335 | - | 1190439 - 1190906 | 17205.8 |
| Trna-glu | Not Available | Not Available | + | 1191919 - 1191991 | Not Available |
| Trna-arg | Not Available | Not Available | + | 1192028 - 1192101 | Not Available |
| Trna-gln | Not Available | Not Available | + | 1192114 - 1192187 | Not Available |
| hypothetical protein | Cabys_1008 | Not Available | - | 1192249 - 1193040 | 30966.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.