Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carboxypeptidase regulatory-like domain-containing protein | Cabys_992 | Not Available | + | 1165286 - 1166131 | 30929.3 |
| transcriptional regulator, laci family | Cabys_993 | Q9CN88 | + | 1166907 - 1167929 | 38274.6 |
| por secretion system c-terminal sorting domain-containing protein | Cabys_994 | Not Available | + | 1168021 - 1170555 | 94914.5 |
| hypothetical protein | Cabys_995 | Not Available | + | 1170559 - 1170735 | 6462.05 |
| outer membrane receptor protein, mostly fe transport | Cabys_996 | P38370 | + | 1170820 - 1173510 | 102195.0 |
| hypothetical protein | Cabys_997 | Not Available | + | 1173677 - 1176901 | 121501.0 |
| uncharacterized protein family (upf0164) | Cabys_998 | Not Available | + | 1176987 - 1178009 | 37787.5 |
| concanavalin a-like lectin/glucanases superfamily protein | Cabys_999 | Not Available | + | 1178177 - 1181311 | 117655.0 |
| multiple sugar transport system substrate-binding protein | Cabys_1000 | P58300 | + | 1181378 - 1182694 | 50583.0 |
| carbohydrate abc transporter membrane protein 1, cut1 family | Cabys_1001 | O32155 | + | 1182691 - 1183569 | 33423.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.