Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide deacetylase family protein, pep-cterm locus subfamily | Cabys_962 | Q81EK9 | + | 1130599 - 1131477 | 34120.4 |
| two-component system, ntrc family, response regulator/two-component system, ntrc family, response regulator pilr | Cabys_963 | Q06065 | + | 1131523 - 1131999 | 17929.3 |
| secondary thiamine-phosphate synthase enzyme | Cabys_964 | O28229 | + | 1132081 - 1132512 | 16363.7 |
| trna (mo5u34)-methyltransferase | Cabys_965 | Q603L5 | - | 1132516 - 1133496 | 37893.7 |
| trna (cmo5u34)-methyltransferase | Cabys_966 | A5F278 | - | 1133493 - 1134215 | 27083.7 |
| thioredoxin | Cabys_967 | P96695 | - | 1134429 - 1134734 | 12040.6 |
| tigr03545 family protein | Cabys_968 | O83494 | - | 1134731 - 1136575 | 70679.6 |
| tigr03546 family protein | Cabys_969 | O83493 | - | 1136572 - 1137099 | 19739.1 |
| hypothetical protein | Cabys_970 | Not Available | - | 1137128 - 1137244 | 4431.81 |
| transposase domain (duf772) | Cabys_971 | Not Available | + | 1137536 - 1139122 | 61379.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.