Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette, subfamily f, member 3 | Cabys_952 | O05519 | + | 1114231 - 1116204 | 75139.6 |
| polysaccharide transporter, pst family | Cabys_953 | P77377 | + | 1116705 - 1118150 | 53698.0 |
| hypothetical protein | Cabys_954 | Not Available | - | 1118312 - 1118428 | 4334.32 |
| por secretion system c-terminal sorting domain-containing protein | Cabys_955 | Not Available | + | 1118587 - 1120560 | 72451.9 |
| por secretion system c-terminal sorting domain-containing protein | Cabys_956 | Q0V9M0 | + | 1120619 - 1122952 | 84652.3 |
| fad binding domain-containing protein | Cabys_957 | O29786 | + | 1122962 - 1124164 | 45194.6 |
| radical sam additional 4fe4s-binding spasm domain-containing protein | Cabys_958 | Q46CH7 | + | 1124209 - 1125294 | 41505.2 |
| hypothetical protein | Cabys_959 | Not Available | + | 1125420 - 1126643 | 45618.2 |
| por secretion system c-terminal sorting domain-containing protein | Cabys_960 | Not Available | + | 1126643 - 1129498 | 107770.0 |
| helix-turn-helix domain-containing protein | Cabys_961 | Q05587 | + | 1129833 - 1130561 | 29105.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.