Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pts system, mannose-specific iib component | Cabys_65 | P26380 | - | 76994 - 77479 | 18405.3 |
| phosphotransferase system, mannose/fructose-specific component iia | Cabys_66 | Not Available | - | 77513 - 77899 | 14191.5 |
| hprk hpr(ser) kinase/phosphatase | Cabys_67 | B3QY08 | - | 77896 - 78882 | 38006.5 |
| putative sigma-54 modulation protein | Cabys_68 | P17160 | - | 78951 - 79268 | 12628.5 |
| xerc integrase/recombinase xerc | Cabys_69 | B4SDZ2 | - | 79271 - 80191 | 35663.9 |
| topa dna topoisomerase i | Cabys_70 | Q9KA23 | - | 80202 - 82436 | 85166.9 |
| uncharacterized conserved protein smg, duf494 family | Cabys_71 | B2I8S7 | - | 82501 - 82971 | 18054.4 |
| exonuclease recj | Cabys_72 | O32044 | - | 83073 - 84749 | 63100.2 |
| exonuclease, dna polymerase iii, epsilon subunit family | Cabys_73 | Q5HN29 | - | 84922 - 87903 | 116739.0 |
| dna polymerase iii, chi subunit | Cabys_74 | P43749 | - | 87908 - 88366 | 17755.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.