Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio japonicus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio japonicus
Accession NumberCP102096.1
Gene Summary
Adenine Count
761783 bp
Thymine Count
763209 bp
Guanine Count
628377 bp
Cytosine Count
630183 bp
Genome Length
2783552 bp
Protein-coding Genes
2501 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase y family protein | NP165_04705 | Q9A3J2 | - | 972002 - 973417 | 54168.4 |
| translesion dna synthesis-associated protein imua | NP165_04710 | Q7N601 | - | 973420 - 974097 | 25271.7 |
| ycik family oxidoreductase | NP165_04715 | P31808 | - | 974249 - 974989 | 26537.0 |
| protease sohb | NP165_04720 | P0AG14 | + | 975077 - 976138 | 38793.9 |
| dead/deah box helicase | NP165_04725 | P25888 | - | 976227 - 977642 | 51713.6 |
| rhombosortase | NP165_04730 | P54493 | - | 977743 - 978309 | 20869.9 |
| dtw domain-containing protein | NP165_04735 | Q9VI85 | + | 978313 - 978918 | 22949.5 |
| anti-phage deoxyguanosine triphosphatase | NP165_04740 | Q87R73 | - | 978998 - 980314 | 50343.9 |
| 5'-deoxynucleotidase | NP165_04745 | Q87R72 | - | 980447 - 981058 | 23314.2 |
| pyridoxal phosphate-dependent aminotransferase | NP165_04750 | P0A960 | - | 981133 - 982347 | 45360.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
