Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio japonicus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio japonicus
Accession NumberCP102096.1
Gene Summary
Adenine Count
761783 bp
Thymine Count
763209 bp
Guanine Count
628377 bp
Cytosine Count
630183 bp
Genome Length
2783552 bp
Protein-coding Genes
2501 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trigger factor | NP165_04355 | Q87R81 | + | 888007 - 889311 | 48185.4 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | NP165_04360 | A7MV87 | + | 889417 - 890043 | 22948.6 |
| atp-dependent protease atp-binding subunit clpx | NP165_04365 | A7MV82 | + | 890125 - 891408 | 46796.0 |
| endopeptidase la | NP165_04370 | P74956 | + | 891537 - 893888 | 87656.3 |
| hu family dna-binding protein | NP165_04375 | Q9KQS9 | + | 894082 - 894354 | 9452.21 |
| peptidylprolyl isomerase | NP165_04380 | P0ADY2 | + | 894523 - 896382 | 68751.7 |
| helix-hairpin-helix domain-containing protein | NP165_04385 | Q57134 | + | 896536 - 896829 | 10665.0 |
| (d)cmp kinase | NP165_04390 | Q8D8J1 | + | 896969 - 897649 | 24588.6 |
| 30s ribosomal protein s1 | NP165_04395 | P0AG69 | + | 897753 - 899423 | 60949.0 |
| integration host factor subunit beta | NP165_04400 | Q8D8J3 | + | 899636 - 899917 | 10606.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
