Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio japonicus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio japonicus
Accession NumberCP102096.1
Gene Summary
Adenine Count
761783 bp
Thymine Count
763209 bp
Guanine Count
628377 bp
Cytosine Count
630183 bp
Genome Length
2783552 bp
Protein-coding Genes
2501 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| d-serine ammonia-lyase | NP165_15310 | A7MYG2 | + | 477306 - 478637 | 48449.0 |
| type iii plp-dependent enzyme | NP165_15315 | O50657 | + | 479012 - 480211 | 43953.5 |
| tyrosine--trna ligase | NP165_15320 | Q87J85 | - | 480290 - 481546 | 46964.9 |
| helix-turn-helix transcriptional regulator | NP165_15325 | P45785 | - | 481637 - 482434 | 30589.5 |
| catalase/peroxidase hpi | NP165_15330 | Q9KRS6 | - | 482587 - 484755 | 79845.2 |
| efflux rnd transporter permease subunit | NP165_15335 | P25197 | - | 485070 - 488192 | 114885.0 |
| efflux rnd transporter periplasmic adaptor subunit | NP165_15340 | Q8G2M7 | - | 488203 - 489348 | 41820.2 |
| had family hydrolase | NP165_15345 | Q8U040 | + | 489903 - 490379 | 17758.9 |
| yitt family protein | NP165_15350 | P42978 | - | 490420 - 491028 | 21888.7 |
| diguanylate cyclase | NP165_15355 | Q9ABX9 | - | 491166 - 492533 | 51542.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
