Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio japonicus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio japonicus
Accession NumberCP102096.1
Gene Summary
Adenine Count
761783 bp
Thymine Count
763209 bp
Guanine Count
628377 bp
Cytosine Count
630183 bp
Genome Length
2783552 bp
Protein-coding Genes
2501 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease atp-binding subunit clpa | NP165_08305 | P0ABI1 | - | 1751351 - 1753621 | 83884.4 |
| atp-dependent clp protease adapter clps | NP165_08310 | A5F294 | - | 1753662 - 1753982 | 12196.6 |
| cold shock domain-containing protein cspd | NP165_08315 | Q9KSW4 | + | 1754453 - 1754674 | 7984.4 |
| nadp-dependent isocitrate dehydrogenase | NP165_08320 | P41561 | - | 1754745 - 1756970 | 80429.5 |
| pseudouridine synthase | NP165_08325 | Q87QY8 | + | 1757272 - 1757970 | 26184.4 |
| aspartate--trna ligase | NP165_08330 | A7N1J1 | - | 1758064 - 1759842 | 65847.8 |
| duf72 domain-containing protein | NP165_08335 | P37348 | + | 1760104 - 1760970 | 32854.6 |
| carboxy-s-adenosyl-l-methionine synthase cmoa | NP165_08340 | A7N1I9 | + | 1761072 - 1761809 | 27767.2 |
| trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmob | NP165_08345 | Q87QV5 | + | 1761915 - 1762886 | 37242.7 |
| atp-dependent zinc protease | NP165_08350 | B0TTR5 | + | 1763123 - 1763869 | 27954.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
