Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas panacisoli |
| Strain | HKS19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas panacisoli HKS19
Accession NumberCP042306.1
Gene Summary
Adenine Count
592016 bp
Thymine Count
594077 bp
Guanine Count
1109571 bp
Cytosine Count
1107361 bp
Genome Length
3403025 bp
Protein-coding Genes
3320 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspf | FPZ24_09810 | P31705 | - | 1917899 - 1919125 | 44745.4 |
| type ii secretion system protein gspe | FPZ24_09815 | P31741 | - | 1919118 - 1920674 | 55552.2 |
| type ii secretion system protein gspd | FPZ24_09820 | E3PJ86 | - | 1920671 - 1922872 | 76405.8 |
| pdz domain-containing protein | FPZ24_09825 | P45777 | - | 1922869 - 1923714 | 28624.7 |
| 2og-fe(ii) oxygenase | FPZ24_09830 | Q20065 | + | 1923837 - 1924523 | 25207.0 |
| tonb-dependent receptor | FPZ24_09835 | P46359 | + | 1924733 - 1927360 | 94139.8 |
| Trna-val | Not Available | Not Available | + | 1927667 - 1927741 | Not Available |
| hu family dna-binding protein | FPZ24_09845 | P02344 | - | 1927795 - 1928067 | 9338.25 |
| endopeptidase la | FPZ24_09850 | P77810 | - | 1928224 - 1930617 | 87256.8 |
| m1 family metallopeptidase | FPZ24_09855 | Q9USX1 | + | 1930616 - 1932409 | 66510.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.