Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | PQ455_04220 | P30864 | + | 893684 - 894604 | 32955.9 |
| hypothetical protein | PQ455_04225 | P27175 | + | 894706 - 895131 | 15372.6 |
| hypothetical protein | PQ455_04230 | Not Available | - | 895220 - 895705 | 16474.1 |
| hupe/urej family protein | PQ455_04235 | P27650 | - | 895702 - 896310 | 20623.0 |
| duf4198 domain-containing protein | PQ455_04240 | P44196 | + | 896451 - 897281 | 29891.8 |
| hypothetical protein | PQ455_04245 | Not Available | - | 897353 - 897610 | 8227.68 |
| duf4331 domain-containing protein | PQ455_04250 | Not Available | - | 897622 - 899238 | 56544.9 |
| hypothetical protein | PQ455_04255 | Not Available | - | 899322 - 900020 | 23714.6 |
| duf4394 domain-containing protein | PQ455_04260 | P29805 | - | 900043 - 902007 | 66821.4 |
| tonb-dependent receptor | PQ455_04265 | A4WG45 | + | 902277 - 904328 | 73088.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.