Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | PQ455_04070 | P17315 | + | 859286 - 862162 | 101980.0 |
| penicillin acylase family protein | PQ455_04075 | P07662 | + | 862249 - 864324 | 75180.3 |
| pirin family protein | PQ455_04080 | P58113 | - | 864383 - 865081 | 25388.6 |
| lysr family transcriptional regulator | PQ455_04085 | P67661 | + | 865206 - 866135 | 32605.8 |
| is630 family transposase | PQ455_04090 | Not Available | + | 866466 - 867414 | 35336.6 |
| yoak family protein | PQ455_04095 | O34343 | - | 867427 - 868119 | 23652.5 |
| alginate export family protein | PQ455_04100 | Not Available | - | 868132 - 869475 | 48449.7 |
| doxx family protein | PQ455_04105 | P0AD47 | - | 869468 - 869890 | 14970.8 |
| amidohydrolase | PQ455_04110 | Q68AP4 | - | 869914 - 871755 | 66826.6 |
| duf1427 family protein | PQ455_04115 | Not Available | - | 871839 - 872081 | 8278.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.