Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ455_03770 | Not Available | + | 803445 - 803567 | 4637.86 |
| Trna-val | Not Available | Not Available | + | 803623 - 803698 | Not Available |
| coa transferase subunit a | PQ455_03780 | B0RVK4 | - | 803758 - 804468 | 25397.6 |
| rlme family rna methyltransferase | PQ455_03785 | A5VFI9 | - | 804683 - 805369 | 24676.9 |
| ppx/gppa phosphatase family protein | PQ455_03790 | L7N5A6 | - | 805366 - 806427 | 37080.7 |
| Trna-gln | Not Available | Not Available | + | 806574 - 806647 | Not Available |
| copper resistance system multicopper oxidase | PQ455_03800 | Q47452 | + | 806710 - 808407 | 61602.5 |
| copper resistance protein b | PQ455_03805 | P12375 | + | 808404 - 809342 | 33792.9 |
| 30s ribosomal protein s20 | PQ455_03810 | A5VG07 | + | 809487 - 809750 | 9358.54 |
| chromosomal replication initiator protein dnaa | PQ455_03815 | Q9S493 | + | 810205 - 811599 | 51615.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.