Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ455_02570 | Not Available | + | 519913 - 521037 | 41203.0 |
| beta-galactosidase trimerization domain-containing protein | PQ455_02575 | Not Available | + | 521154 - 523358 | 81835.2 |
| 2-hydroxy-3-oxopropionate reductase | PQ455_02580 | P77161 | - | 523418 - 524302 | 30182.5 |
| tim barrel protein | PQ455_02585 | Q0KBD1 | - | 524348 - 525127 | 28371.1 |
| l-lactate permease | PQ455_02590 | Q46839 | + | 525291 - 526979 | 59133.0 |
| tonb-dependent receptor | PQ455_02595 | O52903 | + | 527161 - 530052 | 102414.0 |
| hypothetical protein | PQ455_02600 | Not Available | + | 530063 - 531265 | 44365.7 |
| hypothetical protein | PQ455_02605 | P42270 | - | 531278 - 532141 | 30142.3 |
| hypothetical protein | PQ455_02610 | Not Available | - | 532138 - 533292 | 42686.4 |
| pqq-dependent dehydrogenase, methanol/ethanol family | PQ455_02615 | Q8GR64 | + | 533589 - 535688 | 74606.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.