Sphingomonas naphthae DKC-5-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas naphthae
StrainDKC-5-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas naphthae DKC-5-1

Accession NumberCP117411.1

Gene Summary

Adenine Count

633777 bp

Thymine Count

632940 bp

Guanine Count

1323979 bp

Cytosine Count

1329131 bp

Genome Length

3919827 bp

Protein-coding Genes

3655 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
aldo/keto reductasePQ455_02520P77735-510559 - 51159336958.2
lysr family transcriptional regulatorPQ455_02525P30864+511679 - 51258132254.8
lysr family transcriptional regulatorPQ455_02530O33945-512672 - 51358934446.8
muconate/chloromuconate family cycloisomerasePQ455_02535O33949+513699 - 51485640489.2
muconolactone delta-isomerasePQ455_02540O33951+514860 - 51515010888.1
dioxygenasePQ455_02545O33950+515186 - 51607932662.2
rieske 2fe-2s domain-containing proteinPQ455_02550Q51601+516103 - 51748851364.2
benzoate 1,2-dioxygenase small subunitPQ455_02555P23100+517485 - 51797319294.7
benzoate 1,2-dioxygenase electron transfer component bencPQ455_02560P23101+517997 - 51901336411.4
benzoate diol dehydrogenase bendPQ455_02565P07772+519010 - 51978626843.2

Displaying genes 581 – 590 of 3756 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites