Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | PQ455_02270 | Q8GCY1 | - | 453926 - 455203 | 44143.9 |
| 2-oxoglutarate dehydrogenase e1 component | PQ455_02275 | B2S877 | - | 455208 - 458129 | 107189.0 |
| succinate--coa ligase subunit alpha | PQ455_02280 | Q1RH56 | - | 458219 - 459103 | 29864.1 |
| hypothetical protein | PQ455_02285 | Not Available | - | 459161 - 459550 | 13953.5 |
| malate dehydrogenase | PQ455_02290 | P93052 | - | 459550 - 460512 | 33307.4 |
| duf1697 domain-containing protein | PQ455_02295 | Not Available | - | 460644 - 461186 | 18603.4 |
| guanylate kinase | PQ455_02300 | Q5NQE8 | + | 461231 - 461890 | 24739.5 |
| hypothetical protein | PQ455_02305 | Not Available | - | 462573 - 463352 | 27877.4 |
| hypothetical protein | PQ455_02310 | Not Available | + | 463499 - 464371 | 30939.1 |
| na+/h+ antiporter | PQ455_02315 | P9WJI2 | - | 464378 - 465946 | 55169.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.