Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ455_01770 | Not Available | + | 338688 - 339188 | 17852.8 |
| nipsnap family protein | PQ455_01775 | Not Available | - | 339198 - 339506 | 11328.8 |
| nuclear transport factor 2 family protein | PQ455_01780 | Not Available | - | 339531 - 340046 | 19151.7 |
| mfs transporter | PQ455_01785 | P94577 | - | 340061 - 341230 | 39704.2 |
| hypothetical protein | PQ455_01790 | Not Available | - | 341227 - 342561 | 48928.0 |
| nuclear transport factor 2 family protein | PQ455_01795 | Not Available | - | 342558 - 342980 | 15360.3 |
| tonb-dependent receptor | PQ455_01800 | P46359 | - | 343016 - 345415 | 85917.9 |
| glucarate dehydratase | PQ455_01805 | P42206 | + | 345752 - 347110 | 48971.2 |
| dead/deah box helicase | PQ455_01810 | P25888 | - | 347305 - 348624 | 47834.9 |
| m20/m25/m40 family metallo-hydrolase | PQ455_01815 | P06621 | + | 349040 - 350335 | 44779.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.