Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ455_20905 | Not Available | + | 6162 - 6380 | 7664.21 |
| replication initiator protein a | PQ455_20910 | P60119 | - | 6427 - 7539 | 42060.4 |
| type iv secretory system conjugative dna transfer family protein | PQ455_20915 | Q00184 | - | 8264 - 9922 | 59822.8 |
| hypothetical protein | PQ455_20920 | Not Available | - | 9925 - 10188 | 9867.87 |
| aaa family atpase | PQ455_20925 | Not Available | - | 10181 - 10735 | 20703.8 |
| conjugal transfer protein trad | PQ455_20930 | P55420 | - | 10728 - 10937 | 7622.06 |
| conjugal transfer protein trad | PQ455_20935 | Not Available | - | 10975 - 11283 | 10555.3 |
| ti-type conjugative transfer relaxase traa | PQ455_20940 | Q44363 | + | 11457 - 14390 | 107699.0 |
| duf6118 family protein | PQ455_20945 | Not Available | + | 14400 - 15137 | 26786.9 |
| duf1971 domain-containing protein | PQ455_20950 | P45134 | + | 15137 - 15406 | 10103.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.