Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome ubiquinol oxidase subunit i | PQ455_20400 | P26459 | - | 88509 - 89924 | 50921.9 |
| sulfite exporter taue/safe family protein | PQ455_20405 | Q9PFB4 | - | 89917 - 90714 | 26408.9 |
| bifunctional protein tyrosine phosphatase family protein/nad(p)/fad-dependent oxidoreductase | PQ455_20410 | Q54DK1 | - | 90714 - 92372 | 59247.6 |
| duf2892 domain-containing protein | PQ455_20415 | Not Available | - | 92412 - 92615 | 6919.86 |
| yeee/yede family protein | PQ455_20420 | Q9PFB3 | - | 92640 - 93053 | 14155.1 |
| yeee/yede thiosulfate transporter family protein | PQ455_20425 | Q87AD4 | - | 93053 - 93490 | 14465.5 |
| mbl fold metallo-hydrolase | PQ455_20430 | Q3JRV4 | - | 93502 - 94413 | 33258.5 |
| peroxiredoxin | PQ455_20435 | Q8R844 | + | 94510 - 95148 | 22960.5 |
| metalloregulator arsr/smtb family transcription factor | PQ455_20440 | Q87AD5 | + | 95145 - 95546 | 14452.3 |
| duf2256 domain-containing protein | PQ455_20445 | Not Available | - | 95584 - 95715 | 5169.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.