Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr substrate-binding domain-containing protein | PQ455_01225 | P0A9F8 | + | 249624 - 250508 | 32511.2 |
| sodium-translocating pyrophosphatase | PQ455_01230 | P60363 | + | 250637 - 252784 | 72956.5 |
| hypothetical protein | PQ455_01235 | Not Available | + | 252876 - 253583 | 25467.9 |
| 50s ribosomal protein l7/l12 | PQ455_01240 | A5VC06 | - | 253720 - 254094 | 12593.1 |
| 50s ribosomal protein l10 | PQ455_01245 | A5VC07 | - | 254158 - 254679 | 17967.8 |
| glycosyltransferase | PQ455_01250 | Q9XC90 | - | 255018 - 255800 | 29407.1 |
| 50s ribosomal protein l1 | PQ455_01255 | A5V9F6 | - | 255969 - 256667 | 23928.2 |
| 50s ribosomal protein l11 | PQ455_01260 | A5V9F5 | - | 256672 - 257103 | 14920.1 |
| transcription termination/antitermination protein nusg | PQ455_01265 | Q9KV35 | - | 257310 - 257849 | 20003.0 |
| preprotein translocase subunit sece | PQ455_01270 | P43805 | - | 257862 - 258089 | 8290.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.