Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2282 domain-containing protein | PQ455_04520 | Not Available | - | 954829 - 955107 | 9054.93 |
| sigma-70 family rna polymerase sigma factor | PQ455_04525 | A0A0H3CCX2 | + | 955329 - 955862 | 19931.1 |
| duf1109 domain-containing protein | PQ455_04530 | G8QM60 | + | 955859 - 956500 | 23477.6 |
| hypothetical protein | PQ455_04535 | Not Available | + | 956584 - 956841 | 8519.12 |
| duf692 domain-containing protein | PQ455_04540 | A5VEM2 | + | 956941 - 957771 | 30409.3 |
| dna-binding domain-containing protein | PQ455_04545 | Not Available | + | 957768 - 958514 | 26753.7 |
| cytochrome p460 family protein | PQ455_04550 | Not Available | + | 958525 - 958953 | 15398.5 |
| is630 family transposase | PQ455_04555 | Not Available | + | 958988 - 959936 | 35336.6 |
| hypothetical protein | PQ455_04560 | Not Available | + | 959961 - 960179 | 8003.71 |
| is3 family transposase | PQ455_04565 | P24577 | + | 960333 - 961453 | 42713.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.