Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fumarylacetoacetate hydrolase family protein | PQ455_04470 | O06724 | + | 948378 - 949274 | 31462.7 |
| shikimate kinase | PQ455_04475 | A5GQN5 | - | 949265 - 950209 | 34100.8 |
| 2-oxo acid dehydrogenase subunit e2 | PQ455_04480 | Q1RHI5 | - | 950352 - 951530 | 41646.2 |
| hypothetical protein | PQ455_04485 | Not Available | - | 951622 - 951747 | 4919.82 |
| duf2155 domain-containing protein | PQ455_04490 | Not Available | - | 951754 - 951864 | 4481.3 |
| dde-type integrase/transposase/recombinase | PQ455_04495 | P14506 | - | 951861 - 952049 | 7171.87 |
| abc transporter atp-binding protein | PQ455_04500 | P33982 | - | 952046 - 952618 | 20567.1 |
| 3-oxoacyl-[acyl-carrier-protein] synthase iii c-terminal domain-containing protein | PQ455_04505 | A5VC86 | - | 952611 - 953561 | 32718.1 |
| 3-oxoacyl-acp synthase | PQ455_04510 | Not Available | - | 953654 - 954136 | 17106.2 |
| doxx family protein | PQ455_04515 | P44270 | - | 954314 - 954769 | 16516.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.