Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | PQ455_04420 | M1W270 | + | 937290 - 938048 | 25663.9 |
| gmc family oxidoreductase n-terminal domain-containing protein | PQ455_04425 | E4QP00 | + | 938045 - 939733 | 59588.4 |
| bile acid:sodium symporter | PQ455_04430 | P39879 | + | 939730 - 940734 | 35179.0 |
| mfs transporter | PQ455_04435 | Q5EXK5 | + | 940808 - 942175 | 47671.9 |
| sdr family oxidoreductase | PQ455_04440 | Q49117 | + | 942159 - 942914 | 25829.7 |
| prolyl oligopeptidase family serine peptidase | PQ455_04445 | D5EXI2 | + | 942932 - 943705 | 28031.8 |
| tonb-dependent receptor | PQ455_04450 | P46359 | + | 943784 - 945907 | 76301.6 |
| sdr family oxidoreductase | PQ455_04455 | Q9Z8P2 | + | 945914 - 946759 | 28030.7 |
| class ii aldolase/adducin family protein | PQ455_04460 | Q9HYH5 | + | 946770 - 947528 | 27676.3 |
| gntr family transcriptional regulator | PQ455_04465 | P32425 | - | 947552 - 948283 | 27367.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.