Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cryptochrome/photolyase family protein | PQ455_04270 | A9CH39 | + | 904371 - 905921 | 58626.2 |
| uvrb/uvrc motif-containing protein | PQ455_04275 | Not Available | - | 905940 - 906218 | 10043.9 |
| catalase | PQ455_04280 | Q9X576 | - | 906218 - 908302 | 75561.1 |
| catalase family protein | PQ455_04285 | P55495 | - | 908487 - 909572 | 39290.6 |
| fdhf/ydep family oxidoreductase | PQ455_04290 | Q8XAX1 | + | 909690 - 911978 | 82714.4 |
| formate dehydrogenase accessory sulfurtransferase fdhd | PQ455_04295 | Q8UC79 | + | 911989 - 912768 | 27684.4 |
| molybdenum cofactor guanylyltransferase | PQ455_04300 | Q3BTU8 | + | 912765 - 913286 | 18506.3 |
| is6 family transposase | PQ455_04305 | P0C1L0 | - | 913431 - 914024 | 23698.5 |
| tonb-dependent receptor | PQ455_04310 | P46359 | + | 914498 - 916717 | 80169.4 |
| mfs transporter | PQ455_04315 | A0QYL8 | + | 916732 - 918117 | 49523.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.