Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | PQ455_04120 | O31158 | - | 872109 - 872927 | 29376.5 |
| hydrolase | PQ455_04125 | P21367 | - | 873000 - 873659 | 23596.2 |
| taud/tfda family dioxygenase | PQ455_04130 | Q700X4 | + | 873971 - 874840 | 31734.9 |
| nuclear transport factor 2 family protein | PQ455_04135 | Q53216 | - | 874900 - 875448 | 21153.7 |
| pqq-dependent dehydrogenase, methanol/ethanol family | PQ455_04140 | Q8GR64 | - | 875481 - 877595 | 75753.9 |
| tetr/acrr family transcriptional regulator | PQ455_04145 | O34381 | - | 877651 - 878253 | 22149.7 |
| carboxymuconolactone decarboxylase family protein | PQ455_04150 | Not Available | - | 878349 - 878993 | 23340.1 |
| tonb-dependent receptor | PQ455_04155 | P46359 | - | 879023 - 881467 | 87347.3 |
| nuclear transport factor 2 family protein | PQ455_04160 | Q53216 | - | 881541 - 882104 | 20956.4 |
| sdr family nad(p)-dependent oxidoreductase | PQ455_04165 | Q99L04 | - | 882128 - 882991 | 30853.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.