Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ455_03970 | Not Available | + | 841844 - 841990 | 5129.38 |
| flagellar motor protein motb | PQ455_03975 | P55892 | + | 841995 - 842951 | 34325.9 |
| yqge/algh family protein | PQ455_03980 | A5V9R3 | + | 843069 - 843629 | 19491.2 |
| hypothetical protein | PQ455_03985 | Not Available | + | 843783 - 844283 | 17592.2 |
| lyase | PQ455_03990 | P0ADK7 | + | 844438 - 844917 | 17125.2 |
| adenosylhomocysteinase | PQ455_03995 | Q2G6T1 | + | 845047 - 846456 | 50482.4 |
| hypothetical protein | PQ455_04000 | Not Available | + | 846803 - 847000 | 6614.08 |
| peptidoglycan editing factor pgef | PQ455_04005 | Q9RT03 | - | 847010 - 847771 | 26389.3 |
| gnat family n-acetyltransferase | PQ455_04010 | P9WQG4 | - | 847821 - 848354 | 18964.5 |
| sdr family oxidoreductase | PQ455_04015 | P40397 | - | 848368 - 849219 | 29849.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.