Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf465 domain-containing protein | PQ455_03870 | Not Available | - | 820726 - 820881 | 5713.0 |
| duf465 domain-containing protein | PQ455_03875 | Not Available | + | 821218 - 821415 | 7445.13 |
| hsp20 family protein | PQ455_03880 | O69241 | - | 821612 - 822076 | 16955.3 |
| duf1465 family protein | PQ455_03885 | Not Available | + | 822293 - 822739 | 16077.2 |
| s46 family peptidase | PQ455_03890 | V5YM14 | + | 822853 - 824994 | 77352.8 |
| efflux transporter outer membrane subunit | PQ455_03895 | P15727 | + | 825101 - 826606 | 52317.6 |
| efflux rnd transporter periplasmic adaptor subunit | PQ455_03900 | P75830 | + | 826603 - 827940 | 46307.8 |
| abc transporter atp-binding protein | PQ455_03905 | A1U0A9 | + | 827930 - 828652 | 26377.8 |
| abc transporter permease | PQ455_03910 | A0LM36 | + | 828770 - 829975 | 42446.2 |
| ef-hand domain-containing protein | PQ455_03915 | Not Available | + | 829972 - 830685 | 25547.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.