Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ455_03820 | Not Available | + | 811786 - 812016 | 8159.22 |
| ribonuclease hi | PQ455_03825 | Not Available | - | 812692 - 813099 | 14840.9 |
| duf4169 family protein | PQ455_03830 | Not Available | + | 813222 - 813398 | 6500.54 |
| lyttr family dna-binding domain-containing protein | PQ455_03835 | Q8Z5C1 | - | 813471 - 814271 | 30337.5 |
| histidine kinase | PQ455_03840 | O31516 | - | 814287 - 815378 | 40041.4 |
| hypothetical protein | PQ455_03845 | Q4QLR5 | + | 815503 - 816519 | 34046.1 |
| surface lipoprotein assembly modifier | PQ455_03850 | Q9K165 | + | 816593 - 817891 | 46682.0 |
| glutaminase | PQ455_03855 | A5VA34 | + | 818113 - 819060 | 33413.2 |
| xanthine dehydrogenase accessory protein xdhc | PQ455_03860 | Not Available | + | 819057 - 819971 | 30924.7 |
| pilz domain-containing protein | PQ455_03865 | Not Available | + | 820077 - 820502 | 14777.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.