Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fecr domain-containing protein | PQ455_03670 | P23485 | + | 781978 - 782907 | 32764.1 |
| tonb-dependent receptor | PQ455_03675 | P17315 | + | 782904 - 785321 | 85288.9 |
| grea/greb family elongation factor | PQ455_03680 | Q9JVD0 | - | 785340 - 785792 | 16268.2 |
| tonb-dependent receptor | PQ455_03685 | A1JTG3 | - | 785954 - 788098 | 77816.3 |
| sdr family nad(p)-dependent oxidoreductase | PQ455_03690 | A0QYC2 | - | 788315 - 789073 | 25547.9 |
| mfs transporter | PQ455_03695 | P74168 | - | 789095 - 790423 | 47304.0 |
| isochorismatase family protein | PQ455_03700 | Q88FY5 | - | 790420 - 791052 | 22134.7 |
| isocitrate lyase/pep mutase family protein | PQ455_03705 | Q0QLE4 | - | 791042 - 791932 | 30300.8 |
| polysaccharide deacetylase family protein | PQ455_03710 | O13842 | - | 791932 - 792846 | 34931.2 |
| arylmalonate decarboxylase | PQ455_03715 | Q88FY4 | - | 792858 - 793592 | 26445.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.