Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s16 | PQ455_03620 | A5V9P7 | + | 772149 - 772553 | 14550.1 |
| ribosome maturation factor rimm | PQ455_03625 | A5V9P8 | + | 772749 - 773222 | 16491.9 |
| cation acetate symporter | PQ455_03630 | B5R937 | - | 773387 - 775075 | 58909.9 |
| duf485 domain-containing protein | PQ455_03635 | P0AF54 | - | 775072 - 775386 | 10841.5 |
| tetr/acrr family transcriptional regulator | PQ455_03640 | P75952 | - | 775451 - 776077 | 23127.8 |
| efflux transporter outer membrane subunit | PQ455_03645 | P24126 | + | 776162 - 777583 | 49623.1 |
| hlyd family efflux transporter periplasmic adaptor subunit | PQ455_03650 | Q9RQ30 | + | 777607 - 778761 | 40602.5 |
| dha2 family efflux mfs transporter permease subunit | PQ455_03655 | P0AEJ1 | + | 778772 - 780334 | 55500.4 |
| tigr00266 family protein | PQ455_03660 | Q5XDZ5 | - | 780420 - 781253 | 28974.7 |
| sigma-70 family rna polymerase sigma factor | PQ455_03665 | P23484 | + | 781420 - 781929 | 18441.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.