Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ybjn domain-containing protein | PQ455_03520 | Not Available | - | 752348 - 752854 | 18964.1 |
| accessory factor ubik family protein | PQ455_03525 | Not Available | - | 752952 - 753254 | 10518.2 |
| transglycosylase slt domain-containing protein | PQ455_03530 | Q8SCY1 | + | 753409 - 754242 | 29037.1 |
| zinc metallopeptidase | PQ455_03535 | P64431 | - | 754256 - 755146 | 31429.9 |
| m1 family metallopeptidase | PQ455_03540 | Q11011 | + | 755262 - 757871 | 92663.7 |
| patatin-like phospholipase family protein | PQ455_03545 | Q0CNC7 | + | 757874 - 759031 | 42048.2 |
| 3-hydroxybutyrate dehydrogenase | PQ455_03550 | O86034 | + | 759055 - 759840 | 27653.3 |
| duf4893 domain-containing protein | PQ455_03555 | Not Available | + | 759864 - 760508 | 23250.7 |
| hypothetical protein | PQ455_03560 | Not Available | - | 760557 - 761198 | 23711.0 |
| duf882 domain-containing protein | PQ455_03565 | P0AB08 | - | 761285 - 761803 | 18915.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.