Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ455_03370 | Not Available | + | 714662 - 715213 | 21842.0 |
| mobq family relaxase | PQ455_03375 | P55418 | - | 715677 - 716639 | 36851.5 |
| hypothetical protein | PQ455_03380 | Not Available | - | 716931 - 717476 | 19632.7 |
| type iv secretory system conjugative dna transfer family protein | PQ455_03385 | Not Available | - | 717473 - 719056 | 57085.2 |
| hypothetical protein | PQ455_03390 | Not Available | - | 719067 - 719300 | 8808.08 |
| hypothetical protein | PQ455_03395 | Not Available | - | 719348 - 719566 | 8054.38 |
| hypothetical protein | PQ455_03400 | Not Available | - | 719672 - 720076 | 14850.4 |
| chat domain-containing protein | PQ455_03405 | Not Available | - | 720131 - 721897 | 64239.4 |
| hypothetical protein | PQ455_03410 | Not Available | - | 721897 - 722871 | 36402.4 |
| membrane protein insertase yidc | PQ455_03415 | Q9RNL5 | - | 723094 - 724803 | 63032.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.