Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | PQ455_03320 | Not Available | + | 706627 - 707907 | 49344.4 |
| Trna-leu | Not Available | Not Available | + | 707966 - 708049 | Not Available |
| hypothetical protein | PQ455_03330 | Not Available | + | 708310 - 709095 | 29641.1 |
| hypothetical protein | PQ455_03335 | Not Available | + | 709406 - 709624 | 7841.33 |
| type ii toxin-antitoxin system pard family antitoxin | PQ455_03340 | Not Available | + | 709730 - 709993 | 9763.48 |
| type ii toxin-antitoxin system rele/pare family toxin | PQ455_03345 | Q9A9T8 | + | 709997 - 710305 | 11071.5 |
| hypothetical protein | PQ455_03350 | Not Available | + | 710693 - 711151 | 16727.4 |
| hypothetical protein | PQ455_03355 | Not Available | + | 711289 - 712242 | 33632.1 |
| hypothetical protein | PQ455_03360 | Not Available | - | 712751 - 713122 | 13021.4 |
| tyrosine-type recombinase/integrase | PQ455_03365 | Q92ME3 | + | 713368 - 713946 | 21508.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.