Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | PQ455_03270 | P0ACN2 | - | 698870 - 699262 | 14414.3 |
| sdr family oxidoreductase | PQ455_03275 | P39577 | + | 699365 - 700117 | 25720.0 |
| Trna-thr | Not Available | Not Available | + | 700131 - 700205 | Not Available |
| hypothetical protein | PQ455_03285 | Not Available | - | 700258 - 700548 | 10529.7 |
| molybdopterin-dependent oxidoreductase | PQ455_03290 | Q51698 | + | 700615 - 702885 | 79831.3 |
| ferrochelatase | PQ455_03295 | Q92M52 | + | 702882 - 703889 | 36450.2 |
| acetoacetyl-coa reductase | PQ455_03300 | P50205 | + | 703919 - 704641 | 25070.1 |
| ribbon-helix-helix domain-containing protein | PQ455_03305 | Not Available | + | 704770 - 705030 | 9572.69 |
| fe2+-dependent dioxygenase | PQ455_03310 | A5VDM4 | + | 705089 - 705772 | 25082.1 |
| glycine zipper 2tm domain-containing protein | PQ455_03315 | Not Available | - | 705849 - 706310 | 17178.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.