Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cob(i)yrinic acid a,c-diamide adenosyltransferase | PQ455_03220 | P29930 | - | 684462 - 685070 | 22231.0 |
| m13 family metallopeptidase | PQ455_03225 | Q9W5Y0 | - | 685142 - 687130 | 72720.1 |
| hypothetical protein | PQ455_03230 | Not Available | + | 687396 - 687530 | 4608.85 |
| bifunctional metallophosphatase/5'-nucleotidase | PQ455_03235 | P07778 | - | 687591 - 689330 | 60398.3 |
| trehalose-phosphatase | PQ455_03240 | P0CL50 | + | 689544 - 690287 | 25950.2 |
| glycoside hydrolase family 15 protein | PQ455_03245 | Q978S7 | + | 690284 - 692065 | 66930.2 |
| alpha,alpha-trehalose-phosphate synthase (udp-forming) | PQ455_03250 | P55612 | + | 692062 - 693471 | 53276.4 |
| mechanosensitive ion channel | PQ455_03255 | O52401 | - | 693432 - 694520 | 40302.9 |
| beta-glucosidase bglx | PQ455_03260 | Q56078 | + | 694708 - 696987 | 81505.8 |
| diguanylate cyclase | PQ455_03265 | A0A0H3AFM6 | - | 696984 - 698765 | 63958.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.